CDS
Accession Number | TCMCG066C00731 |
gbkey | CDS |
Protein Id | XP_034601341.1 |
Location | complement(join(5795468..5795581,5795679..5795760,5795951..5796060,5796144..5796191,5796565..5796630,5796705..5796836,5796926..5797097,5797522..5797566,5797669..5797736,5797809..5797847,5798323..5798487,5799658..5799723)) |
Gene | LOC117861933 |
GeneID | 117861933 |
Organism | Setaria viridis |
Protein
Length | 368aa |
Molecule type | protein |
Topology | linear |
Data_file_division | PLN |
dblink | BioProject:PRJNA633601 |
db_source | XM_034745450.1 |
Definition | ubiquitin receptor RAD23b-like [Setaria viridis] |
EGGNOG-MAPPER Annotation
COG_category | L |
Description | XPC-binding domain |
KEGG_TC | - |
KEGG_Module | - |
KEGG_Reaction | - |
KEGG_rclass | - |
BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03051 [VIEW IN KEGG] ko03400 [VIEW IN KEGG] |
KEGG_ko |
ko:K10839
[VIEW IN KEGG] |
EC | - |
KEGG_Pathway |
ko03420
[VIEW IN KEGG] ko04141 [VIEW IN KEGG] map03420 [VIEW IN KEGG] map04141 [VIEW IN KEGG] |
GOs |
GO:0003674
[VIEW IN EMBL-EBI] GO:0005488 [VIEW IN EMBL-EBI] GO:0005515 [VIEW IN EMBL-EBI] GO:0005575 [VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005737 [VIEW IN EMBL-EBI] GO:0031593 [VIEW IN EMBL-EBI] GO:0032182 [VIEW IN EMBL-EBI] GO:0043130 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0044877 [VIEW IN EMBL-EBI] GO:0070628 [VIEW IN EMBL-EBI] GO:0140030 [VIEW IN EMBL-EBI] |
Sequence
CDS: ATGCAGCTGACGGTGAAGACCATCAAGGGCGCGAACTTCGAGATCCGGGTGCAGCCCAATGACACGATTATGGCTGTAAAGCAGAAAATTGAAGAGAAACTAGGAAAAGATAGTTATCCATGGGGTCAACAACTGCTAATTTTCACTGGGAAGATTTTGAAAGATGAGAGTACTTTGGACGAGAATAAAGTCAGCGAAAAAGACTTCCTTGTTGTCATGTCCAGTGGAAAGAGCAAAATGTCTGGTTCAAGTGGAGCCTCATCTGCCCAGCTCTCAAGCACTCCTGCAACCAGTCAAGCACCTCCTGTAGATGCTCCACGACAAGCTCCTCAACCCCCGGCGGCAGCAACTACAATTTCTCAGCCTGAAGGACCTCCTGCACATGCCCCCTCAAACACATATGCAGCATCAAATCTACTATCAGGAAGCAATCTTGACACAATGATTAACCAGCTAATGGAGATGGGTGGGGGCAGTTGGGACAGAGATAAAGTCCAACAGGCTCTTCGTGCTGCTTACAACAACCCAGAACGTGCTGTTGAATACCTGTACTCTGGTATTCCAGTAACAGCTGAAGTTGCCGTTCCTGTTGGTGGTCAAGGTTCAAACACGACTGATCGAGCTCCAACAGGGGAAGCCAGTCTCTCTGGAATTCCAAACACTGCTCCACTAAATCTTTTCCCACAGGGGGGTTCCAATGCTGGAGGTGGTGCTGGAGGTGGACCACTTGATTTTCTTAGAAACAACCAGCAGTTTCAAGCACTTAGAGAAATGGTCCACACAAATCCACAAATCTTGCAGCCTATGCTCCAGGAATTGAGCAAGCAGAATCCTCAAATTCTAAGGTTGATTCAGGAGAATCATGCTGAGTTCCTTCAGTTACTAAATGAGCCCTTTGAAGGTGGCGAGGGGGACTTCTTAGAACAACCTGAGCAGGATGAAATGCCTCATGCTATCAGTGTTACACCAGAGGAGCAGGAGGCCATTGGACGGCTTGAATCCATGGGGTTTGAGAGAGCACGTGTCATAGTGGCATTCTTTGCCTGCGACAGGAATGAGGAGCTAGCTGCCAACTATCTTCTTGAGCATGCTGGTGAGGAAGATTAA |
Protein: MQLTVKTIKGANFEIRVQPNDTIMAVKQKIEEKLGKDSYPWGQQLLIFTGKILKDESTLDENKVSEKDFLVVMSSGKSKMSGSSGASSAQLSSTPATSQAPPVDAPRQAPQPPAAATTISQPEGPPAHAPSNTYAASNLLSGSNLDTMINQLMEMGGGSWDRDKVQQALRAAYNNPERAVEYLYSGIPVTAEVAVPVGGQGSNTTDRAPTGEASLSGIPNTAPLNLFPQGGSNAGGGAGGGPLDFLRNNQQFQALREMVHTNPQILQPMLQELSKQNPQILRLIQENHAEFLQLLNEPFEGGEGDFLEQPEQDEMPHAISVTPEEQEAIGRLESMGFERARVIVAFFACDRNEELAANYLLEHAGEED |